Pay check ran in different location

Hi, I got my H1 approved last year. After approval the very first paycheck ran for California location by my employer even though I never worked there. Since then I informed them and they corrected it. But that one paycheck is still showing California location and I got a w2 form for California. Will this cause any issues in future while extension filing or I 40. My employer said it was due to confusion and it shouldn’t be an issue since it’s corrected to the right location. If anyone faced similar situation any input on this is highly appreciated.